BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032F04SP1|AL429598
(879 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig833 1233 0.0
>3x_Contig833
Length = 3148
Score = 1233 bits (622), Expect = 0.0
Identities = 656/662 (99%), Gaps = 4/662 (0%)
Strand = Plus / Plus
Query: 1 gatcctggtcagcaatataccataaatgtaccatttctctttgaattaccgaccacaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2490 gatcctggtcagcaatataccataaatgtaccatttctctttgaattaccgaccacaaca 2549
Query: 61 tcaacgactgctgtgcattattgccactgtctttcgtgatcatgagttaatctggctcca 120
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 2550 tcaacgactgctgtgcataat-gccactgtctttcgtgatcatgagttaatctggctcca 2608
Query: 121 tttctaccatactggatacctaacgagtacctttgtttgatagctggatcacggaatacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2609 tttctaccatactggatacctaacgagtacctttgtttgatagctggatcacggaatacc 2668
Query: 181 tcaagtctttcaagtaatctcataattggccttctattagagttgacgtatgcgttgtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2669 tcaagtctttcaagtaatctcataattggccttctattagagttgacgtatgcgttgtaa 2728
Query: 241 tcactaatagaatatagaacttgacggatgtcttccttcgaatagacagaggtactgtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2729 tcactaatagaatatagaacttgacggatgtcttccttcgaatagacagaggtactgtat 2788
Query: 301 ttagaagctaatttttcagtagcagcctctttttgcttgatcattctttggatctcggcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2789 ttagaagctaatttttcagtagcagcctctttttgcttgatcattctttggatctcggcc 2848
Query: 361 ctggttttacctgtaggactaatatctgcggtagcgt-aaagaattaacttatcttggaa 419
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2849 ctggttttacctgtaggactaatatctgcggtagcgtaaaagaattaacttatcttggaa 2908
Query: 420 aacagcaagagctctcccatgatcctcacttttcccgaggaaagtatggactgtttttat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2909 aacagcaagagctctcccatgatcctcacttttcccgaggaaagtatggactgtttttat 2968
Query: 480 tggtttgaagagatggaactccatatgatcctcaatgtcaggtaatctggagtccattac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2969 tggtttgaagagatggaactccatatgatcctcaatgtcaggtaatctggagtccattac 3028
Query: 540 catgtagcataacttaccgaatgtagttctcattctgtcaggattcataattttataacg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3029 catgtagcataacttaccgaatgtagttctcattctgtcaggattcataattttataacg 3088
Query: 600 tcttccaatttcgaatatgtctttgaaccattctgcattatcactaaagttcttcaactc 659
||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 3089 tcttccaatttcggatatgtctttgaa-cattctgca-tatcactaaagttcttcaactc 3146
Query: 660 ca 661
||
Sbjct: 3147 ca 3148
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6438
Number of Sequences: 1807
Number of extensions: 6438
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 879
length of database: 10,358,551
effective HSP length: 16
effective length of query: 863
effective length of database: 10,329,639
effective search space: 8914478457
effective search space used: 8914478457
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)